Single-Cell Clustering

UMAP Plot

The UMAP plot allows visualization of individual cells in 2D space to capture the similarities between cells. Clustering is performed using the Louvain method.

Top Marker Genes

The Top Marker Genes table includes the top 10 marker genes for each cluster of the UMAP. For each gene, the gene name, ENSEMBL gene ID, log2 fold change, and pValue are shown. The contents of the table are also available in CSV format by selecting Download CSV.